Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903459.1_cds_XP_016453527.1_47644
CDS Infomation

[gene=LOC107777878] [db_xref=GeneID:107777878] [protein=glycine--tRNA ligase, mitochondrial 1-like] [protein_id=XP_016453527.1] [location=join(16737..17222,18720..19102,19417..19534,19670..19864,19957..20181,21244..21303,21394..21474,23755..24160,24875..25107)] [gbkey=CDS]
Sequence

ATGCGTATCGTTCGTGCTCTCACTACCTGCGCGCTTTCCCTTCGCCACCGCGTAATCTCC
ACTCATCTTCTCCGCACTCGTTCATTTCTAAAACCTTACACCGGAGCTCCTGTAACAATG
GCCGCCGCCTCCGAAGACTCACTCCGCCAAGCTCTTGCTCAGAAGCAATCGAGCATTGAG
TTCCAAGGCAACGCCGTCCGCCAATTAAAGTCGTCCGGTGCTTCCAAGCCTGAAATCGAA
GCCGCCGTTCAAGCTTTAAACGCGTTGAAGCTCGAGAAATCATCCATCGAAAGCCAGCTT
CAAACCGCTGCCGGGGGTTCATCGTCCGCCAGCAGAGATGCGTTCCGTCAGAACGTCGTT
AACACTCTCGAGCGCCGTCTGTTTTATATTCCATCTTTCAAAATATATCGAGGCGTCGCT
GGCCTCTATGATTATGGCCCCCCTGGCTGTTCTGTCAAGTCCAATGTACTCGCTTTCTGG
CGTCAGCATTTTGTTTTGGAGGAGAACATGTTGGAAGTTGACTGCCCATGTGTGACCCCT
GAGGTTGTCCTTAAGGCATCTGGTCACGTTGAGAAGTTCACCGATCTTATGGTTAAGGAC
GAGAAGACAGGAACATGTTATCGAGCTGATCATTTGCTCAAGGATTATTGTAAAGAAAAA
CTTGAGAAGGACTTCAGCCTTTCTTCGGAAAAGGCCGCAGAGTTGAAGCACATTCTTGCT
GTCTTGGATGATCTCTCTGCTGAGCAGCTTGGTGCCAAGATAAAGGAGTATGGTATAACT
GCACCAGATACAAAGAATCCACTTTCTGATCCTTATCCATTCAATCTAATGTTTCAGACA
TCCATTGGTCCATCTGGCGTGAGCCCAGGGTATATGCGTCCTGAAACAGCACAGGGCATA
TTTGTAAATTTCAAAGATCTATACTATTATAATGGAAATAAGCTTCCCTTTGCTGCTGCG
CAAATTGGCCAGGCTTTTCGAAATGAGATATCTCCCCGACAAGGTCTTCTCAGAGTCCGT
GAGTTCACTCTGGCAGAAATTGAACATTTTGTTGATCCCCTGGACAAATCTCATCCAAAA
TTTTCCGATGTTGCAAATTTGGAGTTTCTAATGTTTCCTAGGGATGAACAAGTGTCTGGG
CAATGTGCAAAGAGACTTCAGCTTGGTGAAGCTGTTTCTAGTGGAATTGTCAATAATGAA
ACACTCGGGTACTTTATTGGGAGAGTTTATCTTTTCCTAACACGACTTGGAATAGACAAA
GAACGTCTGCGTTTCCGTCAGCATCTTGCAAATGAGATGGCTCACTATGCTGCAGATTGT
TGGGATGCTGAAATTGAGAGTTCTTACGGTTGGATTGAATGTGTTGGGATTGCTGATAGA
TCTGCATATGATTTGCGTGCCCATTCGGAAAAAAGTTCTGTTGCTCTTGTGGCTCAGGAG
AAATTCTCAGAACCAAGAGAAGTAGAGAAACTGGTCATAACACCTCTTAAGAAGGAGCTT
GGACTTGCATTTAAGGGCAACCAAAAGATGGTGACTGAAGCCTTGGAGGCAATGGAAGAA
AAGGTGGCTATGGAGATGAAGGCTGATCTGGAATCCAAGGGGGAGGTGGAGTTCCATGTA
TGTACTCTTGGGAAGAATGTCACCATTAAGAAAAGCATGGTCTCTATTTCCAAGGAAAAA
AAGAAAGAGCACCAAAGGGTGTTTACACCTTCAGTGATTGAGCCCTCATTTGGAATTGGC
CGGATAATATATTGTCTTTATGAGCATTCATTCTACACAAGGCCAAGTAAAGGTGGAGAT
GAGCAGCTAAATGTGTTCCGCTTCCCACCACTAGTGGCTCCCATCAAATGCACTGTTTTT
CCACTGGTTCAGAATCAACAATATGAAGAAGTTGCCAAGTTAATCTCAAAGTCTTTGACT
GCTGCTGGAATCTCACATAAGATTGATATAACAGGTACTTCTATAGGGAAAAGGTATGCA
AGAACAGATGAACTCGGTGTTCCCTTTGCCATCACTGTTGATTCGACGTCATCAGTTACA
GTGCGAGAGAGGGATAGCAAAGATCAGGTCCGGGTGAGCACGGATAAGGTCGCATCAGTT
GTGAGGGAAGTGACTGATGGAGTGAGCACATGGGCAGATGTGTTGAAGATGTATCCTCTA
CATTCTTCAGAAACTGCAGAAGAGTGA

Peptide Sequence

PEP ID

XP_016453527.1
PEP Infomation

PREDICTED: glycine--tRNA ligase, mitochondrial 1-like [Nicotiana tabacum]
Sequence

MRIVRALTTCALSLRHRVISTHLLRTRSFLKPYTGAPVTMAAASEDSLRQALAQKQSSIE
FQGNAVRQLKSSGASKPEIEAAVQALNALKLEKSSIESQLQTAAGGSSSASRDAFRQNVV
NTLERRLFYIPSFKIYRGVAGLYDYGPPGCSVKSNVLAFWRQHFVLEENMLEVDCPCVTP
EVVLKASGHVEKFTDLMVKDEKTGTCYRADHLLKDYCKEKLEKDFSLSSEKAAELKHILA
VLDDLSAEQLGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSIGPSGVSPGYMRPETAQGI
FVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPLDKSHPK
FSDVANLEFLMFPRDEQVSGQCAKRLQLGEAVSSGIVNNETLGYFIGRVYLFLTRLGIDK
ERLRFRQHLANEMAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHSEKSSVALVAQE
KFSEPREVEKLVITPLKKELGLAFKGNQKMVTEALEAMEEKVAMEMKADLESKGEVEFHV
CTLGKNVTIKKSMVSISKEKKKEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKGGD
EQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKLISKSLTAAGISHKIDITGTSIGKRYA
RTDELGVPFAITVDSTSSVTVRERDSKDQVRVSTDKVASVVREVTDGVSTWADVLKMYPL
HSSETAEE

Transcript Sequence

Gene sequence data has not been registered.